You're mixing up a couple of things. The erosion and sediment control plan applies during construction only - same goes for the construction NPDES permit - it's focused only on construction. The rain gardens and other things are post-construction stormwater controls, designed to improve the quality of stormwater runoff from the final, stabilized development. Often through the reduction of runoff. The reason for this is tons of good science (tens of thousands of monitored sites throughout the country) that shows that even residential subdivision runoff can severely degrade natural waters. Pretty severely, sometimes. Fertilizers, pet wastes, etc. It doesn't take much.
Of course, this is all fairly recent stuff and is in the process of being adopted by states and municipalities around the country, so yes, it is possible that your regulator saw a change in the rules part way through your project. Every local or state government is different in how they apply new new rules to existing projects. Your complaint should probably therefore be directed to the State (or city) attorney general, to make sure the environmental regulators are following the appropriate administrative procedures. However, the regulation amendments will usually include a subsection that explicitly lays out how existing projects will be handled, and this probably went through the AGO's review. It's worth a shot if you feel that strongly about it (or have been hit hard financially because of it).
Of course, this is all fairly recent stuff and is in the process of being adopted by states and municipalities around the country, so yes, it is possible that your regulator saw a change in the rules part way through your project. Every local or state government is different in how they apply new new rules to existing projects. Your complaint should probably therefore be directed to the State (or city) attorney general, to make sure the environmental regulators are following the appropriate administrative procedures. However, the regulation amendments will usually include a subsection that explicitly lays out how existing projects will be handled, and this probably went through the AGO's review. It's worth a shot if you feel that strongly about it (or have been hit hard financially because of it).
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